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Marko Toplak and Tomaz Curk and Janez Demsar and Blaz Zupan (2010) Does replication groups scoring reduce false positive rate in SNP interaction discovery?. BMC Genomics, 11 . p. 58.
Miha Stajdohar and Minca Mramor and Blaz Zupan and Janez Demsar (2010) FragViz: visualization of fragmented networks. BMC Bioinformatics, 11 (457).
Blaz Zupan and Janez Demsar (2008) Open-source tools for data mining. Clinics in Laboratory Medicine, 28 (1). pp. 37-54.
Minca Mramor and Gregor Leban and Janez Demsar and Blaz Zupan (2007) Visualization-based cancer microarray data classification analysis. Bioinformatics, 23 (16). pp. 2147-2154.
Peter Juvan and Janez Demsar and Gad Shaulsky and Blaz Zupan (2005) GenePath: from mutations to genetic networks and back. Nucleic Acids Res, 33 (Web Se). W749-W752.
Tomaz Curk and Janez Demsar and Qikai Xu and Gregor Leban and Uros Petrovic and Ivan Bratko and Gad Shaulsky and Blaz Zupan (2005) Microarray data mining with visual programming. Bioinformatics, 21 (3). pp. 396-398.
Nancy Van Driessche and Janez Demsar and Ezgi O Booth and Paul Hill and Peter Juvan and Blaz Zupan and Adam Kuspa and Gad Shaulsky (2005) Epistasis analysis with global transcriptional phenotypes. Nature Genetics, 37 (5). pp. 471-477.
Blaz Zupan and Janez Demsar and Michael W Kattan and J Robert Beck and Ivan Bratko (2000) Machine learning for survival analysis: a case study on recurrence of prostate cancer. Artificial Intelligence in Medicine, 20 (1). pp. 59-75.
Janez Demsar Data Mining: Lecture notes. [Teaching Resource] (Unpublished)