Items where Division is "Faculty of Computer and Information Science > Bioinformatics Laboratory"

Article

Marinka Zitnik and Blaz Zupan (2012) NIMFA: A Python Library for Nonnegative Matrix Factorization. Journal of Machine Learning Research, 13 . pp. 849-853.

Lan Umek and Blaz Zupan (2011) Subgroup discovery in data sets with multi-dimensional responses. Intelligent Data Analysis, 15 (4). pp. 533-549.

Lan Zagar and Francesca Mulas and Silvia Garagna and Zuccotti Maurizio and Riccado Bellazzi and Blaz Zupan (2011) Stage prediction of embryonic stem cell differentiation from genome-wide expression data. Bioinformatics, 27 (18). pp. 2546-2553.

James R Tollervey and Tomaz Curk and Boris Rogelj and Michael Briese and Matteo Cereda and Melis Kayikci and Julian Konig and Tibor Hortobágyi and Agnes L Nishimura and Vera Zupunski and Rickie Patani and Siddharthan Chandran and Gregor Rot and Blaz Zupan and Christopher E Shaw and Jernej Ule (2011) Characterizing the RNA targets and position-dependent splicing regulation by TDP-43. Nature Neuroscience, 14 (4). pp. 452-458.

Tomaz Curk and Gregor Rot and Blaz Zupan (2011) SNPsyn: detection and exploration of SNP-SNP interactions. Nucleic Acids Res, 39 (Suppl ). W444-9.

Julian Konig and Kathi Zarnack and Gregor Rot and Tomaz Curk and Melis Kayikci and Blaz Zupan and Daniel J Turner and Nicholas M Luscombe and Jernej Ule (2011) iCLIP - Transcriptome-wide Mapping of Protein-RNA Interactions with Individual Nucleotide Resolution. Journal of Visualized Experiments, 50 . pii: 2638.

Stefania Crippa and Marco Cassano and Graziella Messina and Daniela Galli and Beatriz G. Galvez and Tomaz Curk and Claudia Altomare and Flavio Ronzoni and Jaan Toelen and Rik Gijsbers and Zeger Debyser and Stefan Janssens and Blaz Zupan and Antonio Zaza and Giulio Cossu and Maurilio Sampaolesi (2011) miR669a and miR669q prevent skeletal muscle differentiation in postnatal cardiac progenitors. J Cell Biol, 193 . pp. 1197-1212.

Zheng Wang and Melis Kayikci and Michael Briese and Kathi Zarnack and Nicholas M Luscombe and Gregor Rot and Blaz Zupan and Tomaz Curk and Jernej Ule (2010) iCLIP predicts the dual splicing effects of TIA-RNA interactions. PLoS Biology, 8 (10). e1000530.

Dragica Smrke and Mirza Biscevic and Barbara UR Smrke and Blaz Zupan (2010) Biomechanical and clinical alterations of the hip joint following femoral neck fracture and implantation of bipolar hip endoprosthesis. Collegium Antropologicum, 34 (3). pp. 931-935.

Anup Parikh and Eryong Huang and Christopher Dinh and Blaz Zupan and Adam Kuspa and Devika Subramanian and Gad Shaulsky (2010) New components of the Dictyostelium PKA pathway revealed by Bayesian analysis of expression data. BMC Bioinformatics, 11 . p. 163.

Rocio Benabentos and Shigenori Hirose and Richard Sucgang and Tomaz Curk and Mariko Katoh and Elizabeth A Ostrowski and Joan E Strassmann and David C Queller and Blaz Zupan and Gad Shaulsky and Adam Kuspa (2009) Polymorphic members of the lag gene family mediate kin discrimination in Dictyostelium. Current Biology, 19 (7). pp. 567-572.

Petra Fey and Pascale Gaudet and Tomaz Curk and Blaz Zupan and Eric M Just and Siddhartha Basu and Sohel N Merchant and Yulia A Bushmanova and Gad Shaulsky and Warren A Kibbe and Rex L Chisholm (2009) dictyBase-a Dictyostelium bioinformatics resource update. Nucleic Acids Res, 37 (Suppl 1). D515-D519.

Tomaz Curk and Janez Demsar and Qikai Xu and Gregor Leban and Uros Petrovic and Ivan Bratko and Gad Shaulsky and Blaz Zupan (2005) Microarray data mining with visual programming. Bioinformatics, 21 (3). pp. 396-398.